Tools
AraBase tools provide browser-based access to Arabidopsis loci, feature sequences, and genome-browser tracks for TAIR12 and TAIR10/Araport11.
Search gene and transcript IDs, then open static gene cards for TAIR12 or TAIR10/Araport11.
Extract genomic and feature-derived sequences by assembly, feature type, and locus identifier.
Explore Arabidopsis chromosomes with release-specific annotation tracks and sequence context.
Tool Status
| Tool | Status | Notes |
|---|---|---|
| Search Locus | Available | Static gene-card search by gene or transcript ID, with limited alias support where aliases are present in local data. |
| Sequence Extract | Available | Static indexed sequence extraction for genes, transcripts, CDS, proteins, and TE/repeat records. |
| Genome Browser | Available | JBrowse 2 with release-specific TAIR12 and TAIR10/Araport11 configurations. |
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